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Commit e91af892 authored by Xuan Gu's avatar Xuan Gu
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Update file nnunet_for_pytorch.def

parent 5756d9a0
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Bootstrap: localimage
From: /proj/nsc_testing/xuan/containers/nvidia_pytorch_21.11-py3.sif
%environment
export PYTHONNOUSERSITE=True
%post
VERSION=21.11.0
mkdir /workspace/nnunet_pyt
cd /workspace/nnunet_pyt
wget --content-disposition https://api.ngc.nvidia.com/v2/resources/nvidia/nnunet_for_pytorch/versions/$VERSION/zip -O nnunet_for_pytorch_$VERSION.zip
unzip nnunet_for_pytorch_21.11.0.zip
pip install --disable-pip-version-check -r requirements.txt
pip install monai==0.8.0 --no-dependencies
pip uninstall -y torchtext
curl "https://awscli.amazonaws.com/awscli-exe-linux-x86_64.zip" -o "awscliv2.zip"
unzip -qq awscliv2.zip
./aws/install
rm -rf awscliv2.zip aws
\ No newline at end of file
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