diff --git a/scripts/benchmark_single_node.sbatch b/scripts/benchmark_single_node.sbatch index a4c124bf03a58ee175a9c2203e775d008b431f01..ee25c40a6e33a73e67897988860cc6d6c67f1173 100644 --- a/scripts/benchmark_single_node.sbatch +++ b/scripts/benchmark_single_node.sbatch @@ -1,8 +1,9 @@ #!/bin/bash +sbatch <<EOT #SBATCH -A nsc #SBATCH --nodes=1 -#SBATCH --gres=gpu:8 +#SBATCH --gres=gpu:${3} #SBATCH --time=0-0:10:00 #SBATCH --reservation=devel @@ -31,3 +32,4 @@ apptainer exec --nv -B ${PWD}/data:/data -B ${PWD}/results:/results nvidia_nnu-n #rm -f results/benchmark_dim${1}_nodes${2}_gpus${3}_batchsize${4}_amp_iteration${5}.json #enroot start --rw --mount ${PWD}/data:/data --mount ${PWD}/results:/results nnunet bash -c "cd /workspace/nnunet_pyt && python scripts/benchmark.py --mode train --gpus ${3} --dim ${1} --batch_size ${4} --nodes ${2} --amp --logname='benchmark_dim${1}_nodes${2}_gpus${3}_batchsize${4}_amp_iteration${5}.json'" +EOT \ No newline at end of file