diff --git a/build.txt b/build.txt deleted file mode 100644 index 26d71ae0432e7590885921371ac9e83ae4a36b08..0000000000000000000000000000000000000000 --- a/build.txt +++ /dev/null @@ -1,8 +0,0 @@ -apptainer build containers/nvidia_pytorch_21.11-py3.sif docker://nvcr.io/nvidia/pytorch:21.11-py3 - - -MODULE_NAME=nnunet_for_pytorch -MODULE_VERSION=21.11.0 -gotesting -apptainer build ./containers/${MODULE_NAME}_${MODULE_VERSION}.sif ./berzelius-benchmarks/${MODULE_NAME}.def - diff --git a/nnunet_for_pytorch.def b/nnunet_for_pytorch.def deleted file mode 100644 index f5803343dee7840aa6e710b1a652b26938dc7994..0000000000000000000000000000000000000000 --- a/nnunet_for_pytorch.def +++ /dev/null @@ -1,26 +0,0 @@ -Bootstrap: localimage -From: /proj/nsc_testing/xuan/containers/nvidia_pytorch_21.11-py3.sif - - -%environment - -export PYTHONNOUSERSITE=True - - -%post - -VERSION=21.11.0 - -mkdir /workspace/nnunet_pyt -cd /workspace/nnunet_pyt -wget --content-disposition https://api.ngc.nvidia.com/v2/resources/nvidia/nnunet_for_pytorch/versions/$VERSION/zip -O nnunet_for_pytorch_$VERSION.zip -unzip nnunet_for_pytorch_21.11.0.zip - -pip install --disable-pip-version-check -r requirements.txt -pip install monai==0.8.0 --no-dependencies -pip uninstall -y torchtext - -curl "https://awscli.amazonaws.com/awscli-exe-linux-x86_64.zip" -o "awscliv2.zip" -unzip -qq awscliv2.zip -./aws/install -rm -rf awscliv2.zip aws \ No newline at end of file