From b51a967b4fa54698bcdc2f266c72f582f0701477 Mon Sep 17 00:00:00 2001
From: Xuan Gu <xuan.gu@liu.se>
Date: Tue, 30 May 2023 11:19:51 +0000
Subject: [PATCH] Update file benchmark_single_node.sbatch
---
scripts/benchmark_single_node.sbatch | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/scripts/benchmark_single_node.sbatch b/scripts/benchmark_single_node.sbatch
index a2d3139..0cdc3aa 100644
--- a/scripts/benchmark_single_node.sbatch
+++ b/scripts/benchmark_single_node.sbatch
@@ -10,10 +10,10 @@
# This version does not run on multi-node
# For apptainer
rm -f results/benchmark_dim${1}_nodes${2}_gpus${3}_batchsize${4}_tf32_iteration${5}.json
-apptainer exec --nv --no-home -B ${PWD}/data:/data -B ${PWD}/results:/results nvidia_nnu-net_for_pytorch.sif bash -c "cd /workspace/nnunet_pyt && python scripts/benchmark.py --mode train --gpus ${3} --dim ${1} --batch_size ${4} --logname='benchmark_dim${1}_nodes${2}_gpus${3}_batchsize${4}_tf32_iteration${5}.json'"
+apptainer exec --nv --no-home -B ${PWD}/data:/data -B ${PWD}/results:/results nvidia_nnu-net_for_pytorch_21.11.0.sif bash -c "cd /workspace/nnunet_pyt && python scripts/benchmark.py --mode train --gpus ${3} --dim ${1} --batch_size ${4} --logname='benchmark_dim${1}_nodes${2}_gpus${3}_batchsize${4}_tf32_iteration${5}.json'"
rm -f results/benchmark_dim${1}_nodes${2}_gpus${3}_batchsize${4}_amp_iteration${5}.json
-apptainer exec --nv --no-home -B ${PWD}/data:/data -B ${PWD}/results:/results nvidia_nnu-net_for_pytorch.sif bash -c "cd /workspace/nnunet_pyt && python scripts/benchmark.py --mode train --gpus ${3} --dim ${1} --batch_size ${4} --amp --logname='benchmark_dim${1}_nodes${2}_gpus${3}_batchsize${4}_amp_iteration${5}.json'"
+apptainer exec --nv --no-home -B ${PWD}/data:/data -B ${PWD}/results:/results nvidia_nnu-net_for_pytorch_21.11.0.sif bash -c "cd /workspace/nnunet_pyt && python scripts/benchmark.py --mode train --gpus ${3} --dim ${1} --batch_size ${4} --amp --logname='benchmark_dim${1}_nodes${2}_gpus${3}_batchsize${4}_amp_iteration${5}.json'"
###################22.11.0
--
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