From aa3afd7e5ed2264548e9d10a6290b026d48b9f52 Mon Sep 17 00:00:00 2001
From: Xuan Gu <xuan.gu@liu.se>
Date: Fri, 13 Oct 2023 17:32:05 +0000
Subject: [PATCH] Update 2 files
- /NVIDIA/DeepLearningExamples/PyTorch/Segmentation/nnUNet/build.txt
- /NVIDIA/DeepLearningExamples/PyTorch/Segmentation/nnUNet/nnunet_for_pytorch_latest.def
---
.../DeepLearningExamples/PyTorch/Segmentation/nnUNet/build.txt | 2 +-
.../PyTorch/Segmentation/nnUNet/nnunet_for_pytorch_latest.def | 2 +-
2 files changed, 2 insertions(+), 2 deletions(-)
diff --git a/NVIDIA/DeepLearningExamples/PyTorch/Segmentation/nnUNet/build.txt b/NVIDIA/DeepLearningExamples/PyTorch/Segmentation/nnUNet/build.txt
index d7f9057..b2b1051 100644
--- a/NVIDIA/DeepLearningExamples/PyTorch/Segmentation/nnUNet/build.txt
+++ b/NVIDIA/DeepLearningExamples/PyTorch/Segmentation/nnUNet/build.txt
@@ -14,7 +14,7 @@ apptainer build $CONTAINER_DIR $DEF_DIR
MODULE_NAME=nnunet_for_pytorch
MODULE_VERSION=latest
CONTAINER_DIR=/proj/nsc_testing/xuan/containers/${MODULE_NAME}_${MODULE_VERSION}.sif
-DEF_DIR=/proj/nsc_testing/xuan/berzelius-benchmarks/PyTorch/Segmentation/nnUNet/${MODULE_NAME}_${MODULE_VERSION}.def
+DEF_DIR=/proj/nsc_testing/xuan/berzelius-benchmarks/NVIDIA/DeepLearningExamples/PyTorch/Segmentation/nnUNet/${MODULE_NAME}_${MODULE_VERSION}.def
apptainer build $CONTAINER_DIR $DEF_DIR
diff --git a/NVIDIA/DeepLearningExamples/PyTorch/Segmentation/nnUNet/nnunet_for_pytorch_latest.def b/NVIDIA/DeepLearningExamples/PyTorch/Segmentation/nnUNet/nnunet_for_pytorch_latest.def
index fabd296..c98805d 100644
--- a/NVIDIA/DeepLearningExamples/PyTorch/Segmentation/nnUNet/nnunet_for_pytorch_latest.def
+++ b/NVIDIA/DeepLearningExamples/PyTorch/Segmentation/nnUNet/nnunet_for_pytorch_latest.def
@@ -14,7 +14,7 @@ VERSION=latest
mkdir /workspace/nnunet_pyt
cd /workspace/nnunet_pyt
git clone https://github.com/NVIDIA/DeepLearningExamples.git
-mv DeepLearningExamples/PyTorch/Segmentation/nnUNet ./
+mv DeepLearningExamples/PyTorch/Segmentation/nnUNet/* ./
rm -rf DeepLearningExamples
pip install --disable-pip-version-check -r requirements.txt
--
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