From 508a7c31e611cfbf0f34f8335b908d106f12a72f Mon Sep 17 00:00:00 2001
From: Xuan Gu <xuan.gu@liu.se>
Date: Tue, 9 May 2023 21:04:47 +0000
Subject: [PATCH] Update file benchmark_sbatch_submit.sh
---
scripts/benchmark_sbatch_submit.sh | 6 +++---
1 file changed, 3 insertions(+), 3 deletions(-)
diff --git a/scripts/benchmark_sbatch_submit.sh b/scripts/benchmark_sbatch_submit.sh
index f51c996..a2aa7b6 100644
--- a/scripts/benchmark_sbatch_submit.sh
+++ b/scripts/benchmark_sbatch_submit.sh
@@ -1,4 +1,4 @@
-cd /proj/nsc/users/xuan/ngc/DeepLearningExamples/PyTorch/Segmentation/nnUNet
+cd /proj/nsc_testing/xuan/Berzelius-nnU-Net-Benchmark
dim=2
@@ -9,7 +9,7 @@ for gpus in {1..8}; do
echo dim ${dim}, nodes ${nodes}, gpus ${gpus}, batch_size ${batch_size}, iteration ${iteration}
# For single node
- sbatch -o sbatch_out/benchmark_dim${dim}_nodes${nodes}_gpus${gpus}_batchsize${batch_size}_iteration${iteration}.out benchmark_single_node.sbatch ${dim} ${nodes} ${gpus} ${batch_size} ${iteration}
+ sbatch -o sbatch_out/benchmark_dim${dim}_nodes${nodes}_gpus${gpus}_batchsize${batch_size}_iteration${iteration}.out scripts/benchmark_single_node.sbatch ${dim} ${nodes} ${gpus} ${batch_size} ${iteration}
sleep 1 # pause to be kind to the scheduler
@@ -23,7 +23,7 @@ for nodes in {2..8}; do
for iteration in {1..100}; do
# For multi node
- sbatch -o sbatch_out/benchmark_dim${dim}_nodes${nodes}_gpus${gpus}_batchsize${batch_size}_iteration${iteration}.out benchmark_multi_node.sbatch ${dim} ${nodes} ${gpus} ${batch_size} ${iteration}
+ sbatch -o sbatch_out/benchmark_dim${dim}_nodes${nodes}_gpus${gpus}_batchsize${batch_size}_iteration${iteration}.out scripts/benchmark_multi_node.sbatch ${dim} ${nodes} ${gpus} ${batch_size} ${iteration}
sleep 1 # pause to be kind to the scheduler
--
GitLab