diff --git a/PyTorch/Segmentation/nnUNet/generate_benchmark_jobs.sh b/PyTorch/Segmentation/nnUNet/generate_benchmark_jobs.sh index 0d464c78c8563a5fa07a091eda0a3ca4d3e449e2..919ad22182a4e6a8cf7e9ec9404d634543319e1f 100644 --- a/PyTorch/Segmentation/nnUNet/generate_benchmark_jobs.sh +++ b/PyTorch/Segmentation/nnUNet/generate_benchmark_jobs.sh @@ -4,9 +4,9 @@ MODULE_NAME=nnunet_for_pytorch MODULE_VERSION=21.11.0 WORK_DIR=/proj/nsc_testing/xuan/berzelius-benchmarks/PyTorch/Segmentation/nnUNet CONTAINER_DIR=/proj/nsc_testing/xuan/containers/${MODULE_NAME}_${MODULE_VERSION}.sif -SBATCH_DIR=$WORK_DIR/sbatch_scripts/benchmark_${6}_${5}_dim${1}_nodes${2}_gpus${3}_batchsize${4}.sbatch -SBATCH_OUT_DIR=$WORK_DIR/sbatch_out/benchmark_${6}_${5}_dim${1}_nodes${2}_gpus${3}_batchsize${4}.out -LOG_DIR=benchmark_${6}_${5}_dim${1}_nodes${2}_gpus${3}_batchsize${4}_amp.json +SBATCH_DIR=$WORK_DIR/sbatch_scripts/benchmark_${6}_${5}_dim${1}_nodes${2}_gpus${3}_batchsize_${4}.sbatch +SBATCH_OUT_DIR=$WORK_DIR/sbatch_out/benchmark_${6}_${5}_dim${1}_nodes${2}_gpus${3}_batchsize_${4}.out +LOG_DIR=benchmark_${6}_${5}_dim${1}_nodes${2}_gpus${3}_batchsize_${4}_amp.json mkdir -p $WORK_DIR/sbatch_out $WORK_DIR/sbatch_scripts cat <<EOT > $SBATCH_DIR